Étiquette : Preprint

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Communicating Scientific Uncertainty in an Age of COVID-19: An Investigation into the Use of Preprints by Digital Media Outlets

Authors : Alice Fleerackers, Michelle Riedlinger, Laura Moorhead, Rukhsana Ahmed, Juan Pablo Alperin

In this article, we investigate the surge in use of COVID-19-related preprints by media outlets. Journalists are a main source of reliable public health information during crises and, until recently, journalists have been reluctant to cover preprints because of the associated scientific uncertainty.

Yet, uploads of COVID-19 preprints and their uptake by online media have outstripped that of preprints about any other topic. Using an innovative approach combining altmetrics methods with content analysis, we identified a diversity of outlets covering COVID-19-related preprints during the early months of the pandemic, including specialist medical news outlets, traditional news media outlets, and aggregators.

We found a ubiquity of hyperlinks as citations and a multiplicity of framing devices for highlighting the scientific uncertainty associated with COVID-19 preprints. These devices were rarely used consistently (e.g., mentioning that the study was a preprint, unreviewed, preliminary, and/or in need of verification).

About half of the stories we analyzed contained framing devices emphasizing uncertainty. Outlets in our sample were much less likely to identify the research they mentioned as preprint research, compared to identifying it as simply “research.” This work has significant implications for public health communication within the changing media landscape.

While current best practices in public health risk communication promote identifying and promoting trustworthy sources of information, the uptake of preprint research by online media presents new challenges.

At the same time, it provides new opportunities for fostering greater awareness of the scientific uncertainty associated with health research findings.

DOI : https://doi.org/10.1080/10410236.2020.1864892

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Preprints in Chemistry: An Exploratory Analysis of Differences with Journal Articles

Author : Mario Pagliaro

The exploratory analysis of the differences between preprints and the corresponding peer reviewed journal articles for ten studies first published on ChemRxiv and on Preprints, though statistically non-significant, suggests outcomes of relevance for chemistry researchers and educators.

The full transition to open science requires new education of doctoral students and young researchers on scholarly communication in the digital age.

The preliminary findings of this study will contribute to inform the curriculum of the aforementioned new courses for young chemists, eventually promoting accelerated innovation in a science that, unique amid all basic sciences, originates a huge industry central to the wealth of nations.

URL : Preprints in Chemistry: An Exploratory Analysis of Differences with Journal Articles

DOI : https://doi.org/10.3390/publications9010005

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Preprints in motion: tracking changes between posting and journal publication

Authors : Jessica K Polka, Gautam Dey, Máté Pálfy, Federico Nanni, Liam Brierley, Nicholas Fraser, Jonathon Alexis Coates

Amidst the COVID-19 pandemic, preprints in the biomedical sciences are being posted and accessed at unprecedented rates, drawing widespread attention from the general public, press and policymakers for the first time.

This phenomenon has sharpened longstanding questions about the reliability of information shared prior to journal peer review. Does the information shared in preprints typically withstand the scrutiny of peer review, or are conclusions likely to change in the version of record?

We assessed preprints that had been posted and subsequently published in a journal between 1st January and 30th April 2020, representing the initial phase of the pandemic response. We utilised a combination of automatic and manual annotations to quantify how an article changed between the preprinted and published version.

We found that the total number of figure panels and tables changed little between preprint and published articles. Moreover, the conclusions of 6% of non-COVID-19-related and 15% of COVID-19-related abstracts undergo a discrete change by the time of publication, but the majority of these changes do not reverse the main message of the paper.

DOI : https://doi.org/10.1101/2021.02.20.432090

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Preprints: Their Evolving Role in Science Communication

Authors : Iratxe Puebla, Jessica Polka, Oya Rieger

The use of preprints for the dissemination of research in some life sciences branches has increased substantially over the last few years. In this document, we discuss preprint publishing and use in the life sciences, from initial experiments back in the 1960s to the current landscape.

We explore the perspectives, advantages and perceived concerns that different stakeholders associate with preprints, and where preprints stand in the context of research assessment frameworks.

We also discuss the role of preprints in the publishing ecosystem and within open science more broadly, before outlining some remaining open questions and considerations for the future evolution of preprints.

URL : Preprints: Their Evolving Role in Science Communication

DOI : https://doi.org/10.31222/osf.io/ezfsk

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Scholarly publishing and journal targeting in the time of the Coronavirus Disease 2019 (COVID-19) pandemic: a cross-sectional survey of rheumatologists and other specialists

Authors : Latika Gupta, Armen Yuri Gasparyan, Olena Zimba, Durga Prasanna Misra

The evolving research landscape in the time of the Coronavirus disease 2019 (COVID-19) pandemic calls for greater understanding of the perceptions of scholars regarding the current state and future of publishing.

An anonymised and validated e-survey featuring 30 questions was circulated among rheumatologists and other specialists over social media to understand preferences while choosing target journals, publishing standards, commercial editing services, preprint archiving, social media and alternative publication activities.

Of 108 respondents, a significant proportion were clinicians (68%), researchers (60%) and educators (47%), with median 23 publications and 15 peer-review accomplishments. The respondents were mainly rheumatologists from India, Ukraine and Turkey.

While choosing target journals, relevance to their field (69%), PubMed Central archiving (61%) and free publishing (59%) were the major factors. Thirty-nine surveyees (36%) claimed that they often targeted local journals for publishing their research. However, only 18 (17%) perceived their local society journals as trustworthy.

Occasional publication in the so-called predatory journals (5, 5%) was reported and obtaining support from commercial editing agencies to improve English and data presentation was not uncommon (23, 21%).

The opinion on preprint archiving was disputed; only one-third believed preprints were useful. High-quality peer review (56%), full and immediate open access (46%) and post-publication social media promotion (32%) were identified as key anticipated features of scholarly publishing in the foreseeable future.

These perceptions of surveyed scholars call for greater access to free publishing, attention to proper usage of English and editing skills, and a larger role for engagement over social media.

URL : Scholarly publishing and journal targeting in the time of the Coronavirus Disease 2019 (COVID-19) pandemic: a cross-sectional survey of rheumatologists and other specialists

DOI : https://doi.org/10.1007/s00296-020-04718-x

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Preprints as accelerator of scholarly communication: An empirical analysis in Mathematics

Authors : Zhiqi Wang, Yue Chen, Wolfgang Glänzel

In this study we analyse the key driving factors of preprints in enhancing scholarly communication. To this end we use four groups of metrics, one referring to scholarly communication and based on bibliometric indicators (Web of Science and Scopus citations), while the others reflect usage (usage counts in Web of Science), capture (Mendeley readers) and social media attention (Tweets).

Hereby we measure two effects associated with preprint publishing: publication delay and impact. We define and use several indicators to assess the impact of journal articles with previous preprint versions in arXiv. In particular, the indicators measure several times characterizing the process of arXiv preprints publishing and the reviewing process of the journal versions, and the ageing patterns of citations to preprints.

In addition, we compare the observed patterns between preprints and non-OA articles without any previous preprint versions in arXiv. We could observe that the « early-view » and « open-access » effects of preprints contribute to a measurable citation and readership advantage of preprints.

Articles with preprint versions are more likely to be mentioned in social media and have shorter Altmetric attention delay. Usage and capture prove to have only moderate but stronger correlation with citations than Tweets. The different slopes of the regression lines between the different indicators reflect different order of magnitude of usage, capture and citation data.

URL : https://arxiv.org/abs/2011.11940

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Characteristics of academic publications, preprints, and registered clinical trials on the COVID-19 pandemic

Authors : Silvia Gianola, Tiago S. Jesus, Silvia Bargeri, Greta Castellini

The COVID-19 pandemic has unleashed a deluge of publications. For this cross-sectional study we compared the amount and reporting characteristics of COVID-19-related academic articles and preprints and the number of ongoing clinical trials and systematic reviews.

To do this, we searched the PubMed database of citations and abstracts for published life science journals by using appropriate combinations of medical subject headings (MeSH terms), and the COVID-19 section of the MedRxiv and BioRxiv archives up to 20 May 2020 (21 weeks).

In addition, we searched Clinicaltrial.gov, Chinese Clinical Trial Registry, EU Clinical Trials Register, and 15 other trial registers, as well as PROSPERO, the international prospective register of systematic reviews.

The characteristics of each publication were extracted. Regression analyses and Z tests were used to detect publication trends and their relative proportions. A total of 3635 academic publications and 3805 preprints were retrieved. Only 8.6% (n = 329) of the preprints were already published in indexed journals. The number of academic and preprint publications increased significantly over time (p<0.001).

Case reports (6% academic vs 0.9% preprints; p<0.001) and letters (17.4% academic vs 0.5% preprints; p<0.001) accounted for a greater share of academic compared to preprint publications. Differently, randomized controlled trials (0.22% vs 0.63%; p<0.001) and systematic reviews (0.08% vs 5%) made up a greater share of the preprints.

The relative proportion of clinical studies registered at Clinicaltrials.gov, Chinese Clinical Trial Registry, and EU Clinical Trials Register was 57.9%, 49.5%, and 98.9%, respectively, most of which were still “recruiting”.

PROSPERO listed 962 systematic review protocols. Preprints were slightly more prevalent than academic articles but both were increasing in number.

The void left by the lack of primary studies was filled by an outpour of immediate opinions (i.e., letters to the editor) published in PubMed-indexed journals. Summarizing, preprints have gained traction as a publishing response to the demand for prompt access to empirical, albeit not peer-reviewed, findings during the present pandemic.

URL : Characteristics of academic publications, preprints, and registered clinical trials on the COVID-19 pandemic

DOI : https://doi.org/10.1371/journal.pone.0240123