Archives des mots-clés : open access

Working with publication technology to make open access journals sustainable

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Authors : Marcel Wrzesinski, Patrick Urs Riechert, Frédéric Dubois, Christian Katzenbach

Over the last 25 years, scholars around the world have used electronic publishing to open up their work, share it with interested publics instantly or even become publishers themselves.

This white paper explores in what ways advances in publication technology in the journal sector (e.g. the widespread use of content management and editorial systems) contributes to a more inclusive and sustainable open access ecosystem.

Drawing on a study we did in Germany in 2019-2021, and for which we tested technical solutions together with the international, peer-reviewed diamond open access journal Internet Policy Review, we present and discuss publishing solutions based on software, workflows, and collaborations with regard to their practicability and scalability.

The paper finds that scholar-led publishing is a force to be reckoned with when it comes to technical solutions tending towards increased bibliodiversity (i.e., variety of content, publication formats and publishing institutions).

URL : Working with publication technology to make open access journals sustainable

DOI : http://dx.doi.org/10.5281/zenodo.4558781

Open Access and Academic Freedom: Teasing Out Some Important Nuances

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Author : Rick Anderson

Discussion of the ways in which open access (OA) and academic freedom interact is fraught for a number of reasons, not least of which is the unwillingness of some participants in the discussion to acknowledge that OA might have any implications for academic freedom at all. Thus, any treatment of such implications must begin with foundational questions.

Most basic among them are: first, what do we mean by ‘open access’; second, what do we mean by ‘academic freedom’? The answers to these questions are not as obvious as one might expect (or hope), but when they are answered it becomes much easier to address a third, also very important, question: in what ways might OA and academic freedom interact?

With every new OA mandate imposed by a government agency, institution of higher education, or funding organization, careful analysis of this issue becomes more urgent. This article attempts to sort out some of these issues, controversies and confusions.

DOI : https://doi.org/10.1111/dech.12636

Publication rate and citation counts for preprints released during the COVID-19 pandemic: the good, the bad and the ugly

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Authors : Diego Añazco, Bryan Nicolalde, Isabel Espinosa, Jose Camacho , Mariam Mushtaq, Jimena Gimenez, Enrique Teran

Background

Preprints are preliminary reports that have not been peer-reviewed. In December 2019, a novel coronavirus appeared in China, and since then, scientific production, including preprints, has drastically increased. In this study, we intend to evaluate how often preprints about COVID-19 were published in scholarly journals and cited.

Methods

We searched the iSearch COVID-19 portfolio to identify all preprints related to COVID-19 posted on bioRxiv, medRxiv, and Research Square from January 1, 2020, to May 31, 2020. We used a custom-designed program to obtain metadata using the Crossref public API.

After that, we determined the publication rate and made comparisons based on citation counts using non-parametric methods. Also, we compared the publication rate, citation counts, and time interval from posting on a preprint server to publication in a scholarly journal among the three different preprint servers.

Results

Our sample included 5,061 preprints, out of which 288 were published in scholarly journals and 4,773 remained unpublished (publication rate of 5.7%). We found that articles published in scholarly journals had a significantly higher total citation count than unpublished preprints within our sample (p < 0.001), and that preprints that were eventually published had a higher citation count as preprints when compared to unpublished preprints (p < 0.001).

As well, we found that published preprints had a significantly higher citation count after publication in a scholarly journal compared to as a preprint (p < 0.001). Our results also show that medRxiv had the highest publication rate, while bioRxiv had the highest citation count and shortest time interval from posting on a preprint server to publication in a scholarly journal.

Conclusions

We found a remarkably low publication rate for preprints within our sample, despite accelerated time to publication by multiple scholarly journals. These findings could be partially attributed to the unprecedented surge in scientific production observed during the COVID-19 pandemic, which might saturate reviewing and editing processes in scholarly journals.

However, our findings show that preprints had a significantly lower scientific impact, which might suggest that some preprints have lower quality and will not be able to endure peer-reviewing processes to be published in a peer-reviewed journal.

URL : Publication rate and citation counts for preprints released during the COVID-19 pandemic: the good, the bad and the ugly

DOI : https://doi.org/10.7717/peerj.10927

Is preprint the future of science? A thirty year journey of online preprint services

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Authors : Boya Xie, Zhihong Shen, Kuansan Wang

Preprint is a version of a scientific paper that is publicly distributed preceding formal peer review. Since the launch of arXiv in 1991, preprints have been increasingly distributed over the Internet as opposed to paper copies.

It allows open online access to disseminate the original research within a few days, often at a very low operating cost. This work overviews how preprint has been evolving and impacting the research community over the past thirty years alongside the growth of the Web.

In this work, we first report that the number of preprints has exponentially increased 63 times in 30 years, although it only accounts for 4% of research articles. Second, we quantify the benefits that preprints bring to authors: preprints reach an audience 14 months earlier on average and associate with five times more citations compared with a non-preprint counterpart. Last, to address the quality concern of preprints, we discover that 41% of preprints are ultimately published at a peer-reviewed destination, and the published venues are as influential as papers without a preprint version.

Additionally, we discuss the unprecedented role of preprints in communicating the latest research data during recent public health emergencies. In conclusion, we provide quantitative evidence to unveil the positive impact of preprints on individual researchers and the community.

Preprints make scholarly communication more efficient by disseminating scientific discoveries more rapidly and widely with the aid of Web technologies. The measurements we present in this study can help researchers and policymakers make informed decisions about how to effectively use and responsibly embrace a preprint culture.

URL : https://arxiv.org/abs/2102.09066

Linguistic Analysis of the bioRxiv Preprint Landscape

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Authors : David N. Nicholson, Vincent Rubinetti, Dongbo Hu, Marvin Thielk, Lawrence E. Hunter, Casey S. Greene

Preprints allow researchers to make their findings available to the scientific community before they have undergone peer review. Studies on preprints within bioRxiv have been largely focused on article metadata and how often these preprints are downloaded, cited, published, and discussed online.

A missing element that has yet to be examined is the language contained within the bioRxiv preprint repository. We sought to compare and contrast linguistic features within bioRxiv preprints to published biomedical text as a whole as this is an excellent opportunity to examine how peer review changes these documents.

The most prevalent features that changed appear to be associated with typesetting and mentions of supplementary sections or additional files. In addition to text comparison, we created document embeddings derived from a preprint-trained word2vec model.

We found that these embeddings are able to parse out different scientific approaches and concepts, link unannotated preprint-peer reviewed article pairs, and identify journals that publish linguistically similar papers to a given preprint.

We also used these embeddings to examine factors associated with the time elapsed between the posting of a first preprint and the appearance of a peer reviewed publication. We found that preprints with more versions posted and more textual changes took longer to publish.

Lastly, we constructed a web application (https://greenelab.github.io/preprint-similarity-search/) that allows users to identify which journals and articles that are most linguistically similar to a bioRxiv or medRxiv preprint as well as observe where the preprint would be positioned within a published article landscape.

DOI : https://doi.org/10.1101/2021.03.04.433874

Communicating Scientific Uncertainty in an Age of COVID-19: An Investigation into the Use of Preprints by Digital Media Outlets

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Authors : Alice Fleerackers, Michelle Riedlinger, Laura Moorhead, Rukhsana Ahmed, Juan Pablo Alperin

In this article, we investigate the surge in use of COVID-19-related preprints by media outlets. Journalists are a main source of reliable public health information during crises and, until recently, journalists have been reluctant to cover preprints because of the associated scientific uncertainty.

Yet, uploads of COVID-19 preprints and their uptake by online media have outstripped that of preprints about any other topic. Using an innovative approach combining altmetrics methods with content analysis, we identified a diversity of outlets covering COVID-19-related preprints during the early months of the pandemic, including specialist medical news outlets, traditional news media outlets, and aggregators.

We found a ubiquity of hyperlinks as citations and a multiplicity of framing devices for highlighting the scientific uncertainty associated with COVID-19 preprints. These devices were rarely used consistently (e.g., mentioning that the study was a preprint, unreviewed, preliminary, and/or in need of verification).

About half of the stories we analyzed contained framing devices emphasizing uncertainty. Outlets in our sample were much less likely to identify the research they mentioned as preprint research, compared to identifying it as simply “research.” This work has significant implications for public health communication within the changing media landscape.

While current best practices in public health risk communication promote identifying and promoting trustworthy sources of information, the uptake of preprint research by online media presents new challenges.

At the same time, it provides new opportunities for fostering greater awareness of the scientific uncertainty associated with health research findings.

DOI : https://doi.org/10.1080/10410236.2020.1864892

Bibliodiversity at the Centre: Decolonizing Open Access

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Author : Monica Berger

The promise of open access for the global South has not been fully met. Publishing is dominated by Northern publishers, which disadvantages Southern authors through platform capitalism and open access models requiring article processing charges to publish.

This article argues that through the employment of bibliodiversity — a sustainable, anticolonial ethos and practice developed in Latin America — the South can reclaim and decolonize open access and nurture scholarly communities.

Self‐determination and locality are at the core of bibliodiversity which rejects the domination of international, English‐language journal publishing. As articulated by the Jussieu Call, wide‐ranging, scholarly‐community‐based, non‐profit and sustainable models for open access are integral to bibliodiversity, as is reform of research evaluation systems.

Predatory publishing exploits open access and perpetuates the marginalization of Southern scholars. Predatory journals are often also conflated with legitimate Southern journals. The article concludes with a discussion of Southern open access initiatives, highlighting large‐scale infrastructure in Latin America and library‐based publishing in Africa, which express the true spirit of open access as a commons for knowledge as a public good.

DOI : https://doi.org/10.1111/dech.12634