Archives des mots-clés : open science

Reproducible and reusable research: Are journal data sharing policies meeting the mark?

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Author : Nicole A Vasilevsky, Jessica Minnier, Melissa A Haendel, Robin E Champieux

Background

There is wide agreement in the biomedical research community that research data sharing is a primary ingredient for ensuring that science is more transparent and reproducible.

Publishers could play an important role in facilitating and enforcing data sharing; however, many journals have not yet implemented data sharing policies and the requirements vary widely across journals. This study set out to analyze the pervasiveness and quality of data sharing policies in the biomedical literature.

Methods

The online author’s instructions and editorial policies for 318 biomedical journals were manually reviewed to analyze the journal’s data sharing requirements and characteristics.

The data sharing policies were ranked using a rubric to determine if data sharing was required, recommended, required only for omics data, or not addressed at all. The data sharing method and licensing recommendations were examined, as well any mention of reproducibility or similar concepts.

The data was analyzed for patterns relating to publishing volume, Journal Impact Factor, and the publishing model (open access or subscription) of each journal.

Results

11.9% of journals analyzed explicitly stated that data sharing was required as a condition of publication. 9.1% of journals required data sharing, but did not state that it would affect publication decisions. 23.3% of journals had a statement encouraging authors to share their data but did not require it.

There was no mention of data sharing in 31.8% of journals. Impact factors were significantly higher for journals with the strongest data sharing policies compared to all other data sharing mark categories. Open access journals were not more likely to require data sharing than subscription journals.

Discussion

Our study confirmed earlier investigations which observed that only a minority of biomedical journals require data sharing, and a significant association between higher Impact Factors and journals with a data sharing requirement.

Moreover, while 65.7% of the journals in our study that required data sharing addressed the concept of reproducibility, as with earlier investigations, we found that most data sharing policies did not provide specific guidance on the practices that ensure data is maximally available and reusable.

URL : Reproducible and reusable research: Are journal data sharing policies meeting the mark?

DOI : https://peerj.com/articles/3208/

 

Open Media Science

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Authors : Kristian Martiny, David Budtz Pedersen, Alfred Birkegaard

In this article, we present three challenges to the emerging Open Science (OS) movement: the challenge of communication, collaboration and cultivation of scientific research. We argue that to address these challenges OS needs to include other forms of data than what can be captured in a text and extend into a fully-fledged Open Media movement engaging with new media and non-traditional formats of science communication.

We discuss two cases where experiments with open media have driven new collaborations between scientists and documentarists. We use the cases to illustrate different advantages of using open media to face the challenges of OS.

URL : Open Media Science

Alternative location : https://jcom.sissa.it/archive/15/06/JCOM_1506_2016_A02

Towards an open science publishing platform

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Authors : Vitek Tracz, Rebecca Lawrence

The way science and research is done is rapidly becoming more open and collaborative. The traditional way of publishing new findings in journals is becoming increasingly outdated and no longer serves the needs of much of science.

Whilst preprints can bring significant benefits of removing delay and selection, they do not go far enough if simply implemented alongside the existing journal system. We propose that we need a new approach, an Open Science Platform, that takes the benefits of preprints but adds formal, invited, and transparent post-publication peer review.

This bypasses the problems of the current journal system and, in doing so, moves the evaluation of research and researchers away from the journal-based Impact Factor and towards a fairer system of article-based qualitative and quantitative indicators.

In the long term, it should be irrelevant where a researcher publishes their findings. What is important is that research is shared and made available without delay within a framework that encourages quality standards and requires all players in the research community to work as collaborators.

URL : Towards an open science publishing platform

DOI : https://dx.doi.org/10.12688%2Ff1000research.7968.1

Collaboration at International, National and Institutional Level – Vital in Fostering Open Science

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Authors :Kristiina Hormia-Poutanen, Pirjo-Leena Forsström

Open science and open research provide potential for new discoveries and solutions to global problems, thus are automatically extending beyond the boundaries of an individual research laboratory.

By nature they imply and lead to collaboration among researchers. This collaboration should be established on all possible levels: institutional, national and international. The present paper looks at the situation in Finland, it shows how these collaborations are organized at the various levels.

The special role played by LIBER is evidenced. The advantages of these collaborations are highlighted.

URL : Collaboration at International, National and Institutional Level – Vital in Fostering Open Science

DOI : http://doi.org/10.18352/lq.10157

A Vision for Open Cyber-Scholarly Infrastructures

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Author : Costantino Thanos

The characteristics of modern science, i.e., data-intensive, multidisciplinary, open, and heavily dependent on Internet technologies, entail the creation of a linked scholarly record that is online and open.

Instrumental in making this vision happen is the development of the next generation of Open Cyber-Scholarly Infrastructures (OCIs), i.e., enablers of an open, evolvable, and extensible scholarly ecosystem.

The paper delineates the evolving scenario of the modern scholarly record and describes the functionality of future OCIs as well as the radical changes in scholarly practices including new reading, learning, and information-seeking practices enabled by OCIs.

URL : A Vision for Open Cyber-Scholarly Infrastructures

Alternative location : http://www.mdpi.com/2304-6775/4/2/13

Stepping up Open Science Training for European Research

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Authors : Birgit Schmidt, Astrid Orth, Gwen Franck, Iryna Kuchma, Petr Knoth, José Carvalho

Open science refers to all things open in research and scholarly communication: from publications and research data to code, models and methods as well as quality evaluation based on open peer review.

However, getting started with implementing open science might not be as straightforward for all stakeholders. For example, what do research funders expect in terms of open access to publications and/or research data?

Where and how to publish research data? How to ensure that research results are reproducible? These are all legitimate questions and, in particular, early career researchers may benefit from additional guidance and training.

In this paper we review the activities of the European-funded FOSTER project which organized and supported a wide range of targeted trainings for open science, based on face-to-face events and on a growing suite of e-learning courses.

This article reviews the approach and experiences gained from the first two years of the project.

URL : Stepping up Open Science Training for European Research

Alternative location : http://www.mdpi.com/2304-6775/4/2/16

Transparency: the emerging third dimension of Open Science and Open Data

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This paper presents an exploration of the concept of research transparency. The policy context is described and situated within the broader arena of open science. This is followed by commentary on transparency within the research process, which includes a brief overview of the related concept of reproducibility and the associated elements of research integrity, fraud and retractions.

A two-dimensional model or continuum of open science is considered and the paper builds on this foundation by presenting a three-dimensional model, which includes the additional axis of ‘transparency’. The concept is further unpacked and preliminary definitions of key terms are introduced: transparency, transparency action, transparency agent and transparency tool.

An important linkage is made to the research lifecycle as a setting for potential transparency interventions by libraries. Four areas are highlighted as foci for enhanced engagement with transparency goals: Leadership and Policy, Advocacy and Training, Research Infrastructures and Workforce Development.

DOI: https://www.liberquarterly.eu/articles/10.18352/lq.10113/