First Line Research Data Management for Life Sciences: a Case Study

Authors : J. Paul van Schayck, Maarten Coonen

Modern life sciences studies depend on the collection, management and analysis of comprehensive datasets in what has become data-intensive research. Life science research is also characterised by having relatively small groups of researchers.

This combination of data-intensive research performed by a few people has led to an increasing bottleneck in research data management (RDM). Parallel to this, there has been an urgent call by initiatives like FAIR and Open Science to openly publish research data which has put additional pressure on improving the quality of RDM.

Here, we reflect on the lessons learnt by DataHub Maastricht, a RDM support group of the Maastricht University Medical Centre (MUMC+) in Maastricht, the Netherlands, in providing first-line RDM support for life sciences.

DataHub Maastricht operates with a small core team, and is complemented with disciplinary data stewards, many of whom have joint positions with DataHub and a research group. This organisational model helps creating shared knowledge between DataHub and the data stewards, including insights how to focus support on the most reusable datasets. This model has shown to be very beneficial given limited time and personnel.

We found that co-hosting tailored platforms for specific domains, reducing storage costs by implementing tiered storage and promoting cross-institutional collaboration through federated authentication were all effective features to stimulate researchers to initiate RDM.

Overall, utilising the expertise and communication channel of the embedded data stewards was also instrumental in our RDM success. Looking into the future, we foresee the need to further embed the role of data stewards into the lifeblood of the research organisation, along with policies on how to finance long-term storage of research data.

The latter, to remain feasible, needs to be combined with a further formalising of appraisal and reappraisal of archived research data.

URL : First Line Research Data Management for Life Sciences: a Case Study

DOI : https://doi.org/10.2218/ijdc.v16i1.761

Open research data: A case study into institutional and infrastructural arrangements to stimulate open research data sharing and reuse

Authors : Thijmen van Gend, Anneke Zuiderwijk

This study investigates which combination of institutional and infrastructural arrangements positively impact research data sharing and reuse in a specific case. We conducted a qualitative case study of the institutional and infrastructural arrangements implemented at Delft University of Technology in the Netherlands.

In the examined case, it was fundamental to change the mindset of researchers and to make them aware of the benefits of sharing data. Therefore, arrangements should be designed bottom-up and used as a “carrot” rather than as a “stick.” Moreover, support offered to researchers should cover at least legal, financial, administrative, and practical issues of research data management and should be informal in nature.

Previous research describes generic institutional and infrastructural instruments that can stimulate open research data sharing and reuse. This study is among the first to analyze what and how infrastructural and institutional arrangements work in a particular context. It provides the basis for other scholars to study such arrangements in different contexts.

Open data policymakers, universities, and open data infrastructure providers can use our findings to stimulate data sharing and reuse in practice, adapted to the contextual situation. Our study focused on a single case and a particular part of the university.

We recommend repeating this research in other contexts, that is, at other universities, faculties, and involving other research data infrastructure providers.

URL : Open research data: A case study into institutional and infrastructural arrangements to stimulate open research data sharing and reuse

DOI : https://doi.org/10.1177/09610006221101200

How transformative agreements are actually transforming the subscription system: a society publisher’s perspective

Authors : Graham Anderson, Jade Heyman, Maggie Simmons

Transformative agreements (TAs) are useful tools to accelerate the growth in open access (OA) for small publishers with limited resources, such as the three discussing the advantages and impact of TAs in this article.

The Royal Society, the Microbiology Society and the Geological Society observe an uptake in OA output with the increase in demand for TAs. While TA models differ across publishers, successful and sustainable models are characterized by transparency in pricing and data, simplicity, equitability and above all a transformation objective of achieving full OA.

Collaboration with institutions and consortia is key to realizing mutual goals and managing the agreement and implementation of complex arrangements with limited resources. The Royal Society, with over 320 institutions opted in, the Microbiology Society with over 250 and the Geological Society with over 40, are all mobilizing their resources and improving their systems to move away from paywall and subscription models.

URL : How transformative agreements are actually transforming the subscription system: a society publisher’s perspective

DOI : http://doi.org/10.1629/uksg.579

Implementing the Declaration on Research Assessment: a publisher case study

Authors : Victoria Gardner, Mark Robinson, Elisabetta O’Connell

There has been much debate around the role of metrics in scholarly communication, with particular focus on the misapplication of journal metrics, such as the impact factor in the assessment of research and researchers.

Various initiatives have advocated for a change in this culture, including the Declaration on Research Assessment (DORA), which invites stakeholders throughout the scholarly communication ecosystem to sign up and show their support for practices designed to address the misuse of metrics.

This case study provides an overview of the process undertaken by a large academic publisher (Taylor & Francis Group) in signing up to DORA and implementing some of its key practices in the hope that it will provide some guidance to others considering becoming a signatory.

Our experience suggests that research, consultation and flexibility are crucial components of the process. Additionally, approaching signing with a project mindset versus a ‘sign and forget’ mentality can help organizations to understand the practical implications of signing, to anticipate and mitigate potential obstacles and to support cultural change.

URL : Implementing the Declaration on Research Assessment: a publisher case study

DOI : http://doi.org/10.1629/uksg.573

Open access through Subscribe to Open: a society publisher’s implementation

Authors: Sara Bosshart, Rod Cookson, Philipp Hess

As pressures mount from global funding mandates and initiatives like Plan S, publishers are seeking sustainable solutions to transition their subscription portfolios to open access.

For self-publishing societies with niche portfolios and low publication volumes, traditional transition options such as article processing charge models or transformative agreements are limited or out of reach and often involve significant financial risk.

In this article, we focus on one society publisher’s implementation of Subscribe to Open (S2O): an emerging open access model that moves away from article-level charges, instead leveraging existing subscription revenues and infrastructure to achieve seamless and sustainable open access.

We outline the advantages of this model for society publishers, the parameters to consider when implementing the model, the initial community response to a successful implementation and some early data highlighting the effect of the S2O model on our journals.

URL : Open access through Subscribe to Open: a society publisher’s implementation

DOI : http://doi.org/10.1629/uksg.567

Research data management and services: Resources for different data practitioners

Author : Gilbert Mushi

The emergence of data-driven research and demands for the establishment of Research Data Management (RDM) has created interest in academic institutions and research organizations globally.

Some of the libraries especially in developed countries have started offering RDM services to their communities. Although lagging behind, some academic libraries in developing countries are at the stage of planning or implementing the service. However, the level of RDM awareness is very low among researchers, librarians and other data practitioners.

The objective of this paper is to present available open resources for different data practitioners particularly researchers and librarians.

It includes training resources for both researchers and librarians, Data Management Plan (DMP) tool for researchers; data repositories available for researchers to freely archive and share their research data to the local and international communities.

A case study with a survey was conducted at the University of Dodoma to identify relevant RDM services so that librarians could assist researchers to make their data accessible to the local and international community.

The study findings revealed a low level of RDM awareness among researchers and librarians. Over 50% of the respondent indicated their perceived knowledge as poor in the following RDM knowledge areas; DMP, data repository, long term digital preservation, funders RDM mandates, metadata standards describing data and general awareness of RDM.

Therefore, this paper presents available open resources for different data practitioners to improve RDM knowledge and boost the confidence of academic and research libraries in establishing the service.

URL : Research data management and services: Resources for different data practitioners

DOI : https://doi.org/10.29173/iq995

Extraction and validation of scientific data for the identification of publications in open access journals

Authors : Patrícia Mascarenhas Dias, Thiago Magela Rodrigues Dias, Gray Farias Moita, Adilson Luiz Pinto

This work aims to identify articles published in open access journals registered in the Lattes Platform curricula. Currently, the curricular data from the Lattes Platform has been the source of several studies that adopt bibliometric metrics to understand scientific evolution in Brazil. However, when registering a publication in a curriculum, only basic information from the magazine is informed.

Therefore, to quantify the publications made in open access journals, a strategy is proposed that uses data from the Directory of Open Access Journals, validating the publications and, thus, obtaining a process that allows identifying which publications were made in this communication format.

Therefore, using the proposed methodology, which has a low computational cost, it was possible to quantify in an unprecedented way the publications of Brazilians in open access journals registered in the curricula of the Lattes Platform.

In addition, having the authors’ data of the publications, it was possible to understand how these authors are geographically distributed in the country, what their areas of operation are and how they have published the results of their research in open access.

It is noteworthy that they are generally published in Portuguese and English. Over the last few years, the representativeness of publications in open access journals has increased.

URL : Extraction and validation of scientific data for the identification of publications in open access journals

DOI : https://doi.org/10.1590/2318-0889202234e210040