The NIH Open Citation Collection: A public access, broad coverage resource

Authors : B. Ian Hutchins, Kirk L. Baker, Matthew T. Davis, Mario A. Diwersy, Ehsanul Haque, Robert M. Harriman, Travis A. Hoppe, Stephen A. Leicht, Payam Meyer, George M. Santangelo

Citation data have remained hidden behind proprietary, restrictive licensing agreements, which raises barriers to entry for analysts wishing to use the data, increases the expense of performing large-scale analyses, and reduces the robustness and reproducibility of the conclusions.

For the past several years, the National Institutes of Health (NIH) Office of Portfolio Analysis (OPA) has been aggregating and enhancing citation data that can be shared publicly. Here, we describe the NIH Open Citation Collection (NIH-OCC), a public access database for biomedical research that is made freely available to the community.

This dataset, which has been carefully generated from unrestricted data sources such as MedLine, PubMed Central (PMC), and CrossRef, now underlies the citation statistics delivered in the NIH iCite analytic platform.

We have also included data from a machine learning pipeline that identifies, extracts, resolves, and disambiguates references from full-text articles available on the internet. Open citation links are available to the public in a major update of iCite (https://icite.od.nih.gov).

URL : The NIH Open Citation Collection: A public access, broad coverage resource

DOI : https://doi.org/10.1371/journal.pbio.3000385

 

The diverse niches of megajournals: Specialism within generalism

Authors: Kyle Siler, Vincent Larivière, Cassidy R. Sugimoto

Over the past decade, megajournals have expanded in popularity and established a legitimate niche in academic publishing. Leveraging advantages of digital publishing, megajournals are characterized by large publication volume, broad interdisciplinary scope, and peer‐review filters that select primarily for scientific soundness as opposed to novelty or originality.

These publishing innovations are complementary and competitive vis‐à‐vis traditional journals. We analyze how megajournals (PLOS One, Scientific Reports) are represented in different fields relative to prominent generalist journals (Nature, PNAS, Science) and “quasi‐megajournals” (Nature Communications, PeerJ).

Our results show that both megajournals and prominent traditional journals have distinctive niches, despite the similar interdisciplinary scopes of such journals.

These niches—defined by publishing volume and disciplinary diversity—are dynamic and varied over the relatively brief histories of the analyzed megajournals. Although the life sciences are the predominant contributor to megajournals, there is variation in the disciplinary composition of different megajournals.

The growth trajectories and disciplinary composition of generalist journals—including megajournals—reflect changing knowledge dissemination and reward structures in science.

URL : The diverse niches of megajournals: Specialism within generalism

DOI : https://doi.org/10.1002/asi.24299

Echoes des publications scientifiques en SHS sur les réseaux sociaux. Le cas des contenus d’Open Édition sur Twitter.

Auteurs/Authors : Lucie Loubère, Fidelia Ibekwe-Sanjuan

Les réseaux sociaux en se diffusant sur l’intégralité de la société sont également entrés dans le monde de la recherche. Ces outils accélèrent la circulation de l’information, et pourraient atteindre une audience différente du circuit universitaire.

Parallèlement les plateformes de savoir ouvert se développent et rendent accessible à tout le monde le savoir scientifique. Notre étude se focalise sur l’étude des tweets émis entre 2013 et 2017 pointant vers un contenu d’OpenEdition. Nous avons analysé les réseaux de retweets ainsi que les contenus textuels des tweets par étude lexicométrique.

Les résultats tendent à montrer une conservation des pratiques institutionnelles avec un cloisonnement linguistique et disciplinaire tant dans les pratiques de retweets que dans les contenus textuels.

URL : https://hal.archives-ouvertes.fr/hal-02307664

Revisiting “the 1990s debutante”: Scholar‐led publishing and the prehistory of the open access movement

Author : Samuel A. Moore

The movement for open access publishing (OA) is often said to have its roots in the scientific disciplines, having been popularized by scientific publishers and formalized through a range of top‐down policy interventions. But there is an often‐neglected prehistory of OA that can be found in the early DIY publishers of the late 1980s and early 1990s.

Managed entirely by working academics, these journals published research in the humanities and social sciences and stand out for their unique set of motivations and practices.

This article explores this separate lineage in the history of the OA movement through a critical‐theoretical analysis of the motivations and practices of the early scholar‐led publishers.

Alongside showing the involvement of the humanities and social sciences in the formation of OA, the analysis reveals the importance that these journals placed on experimental practices, critique of commercial publishing, and the desire to reach new audiences.

Understood in today’s context, this research is significant for adding complexity to the history of OA, which policymakers, advocates, and publishing scholars should keep in mind as OA goes mainstream.

DOI : https://doi.org/10.1002/asi.24306

The Future of OA: A large-scale analysis projecting Open Access publication and readership

Authors : Heather Piwowar, Jason Priem, Richard Orr

Understanding the growth of open access (OA) is important for deciding funder policy, subscription allocation, and infrastructure planning.

This study analyses the number of papers available as OA over time. The models includes both OA embargo data and the relative growth rates of different OA types over time, based on the OA status of 70 million journal articles published between 1950 and 2019.

The study also looks at article usage data, analyzing the proportion of views to OA articles vs views to articles which are closed access. Signal processing techniques are used to model how these viewership patterns change over time. Viewership data is based on 2.8 million uses of the Unpaywall browser extension in July 2019.

We found that Green, Gold, and Hybrid papers receive more views than their Closed or Bronze counterparts, particularly Green papers made available within a year of publication. We also found that the proportion of Green, Gold, and Hybrid articles is growing most quickly.

In 2019:

  • 31% of all journal articles are available as OA
  • 52% of article views are to OA article

Given existing trends, we estimate that by 2025:

  • 44% of all journal articles will be available as OA

  • 70% of article views will be to OA articles

The declining relevance of closed access articles is likely to change the landscape of scholarly communication in the years to come.

URL : The Future of OA: A large-scale analysis projecting Open Access publication and readership

DOI : https://doi.org/10.1101/795310

Data papers as a new form of knowledge organization in the field of research data

Authors : Joachim Schöpfel, Dominic Farace, Hélène Prost, Antonella Zane

Data papers have been defined as scholarly journal publications whose primary purpose is to describe research data. Our survey provides more insights about the environment of data papers, i.e. disciplines, publishers and business models, and about their structure, length, formats, metadata and licensing.

Data papers are a product of the emerging ecosystem of data-driven open science. They contribute to the FAIR principles for research data management. However, the boundaries with other categories of academic publishing are partly blurred. Data papers are (can be) generated automatically and are potentially machine-readable.

Data papers are essentially information, i.e. description of data, but also partly contribute to the generation of knowledge and data on its own. Part of the new ecosystem of open and data-driven science, data papers and data journals are an interesting and relevant object for the assessment and understanding of the transition of the former system of academic publishing.

URL : https://halshs.archives-ouvertes.fr/ISKOFRANCE2019/halshs-02284548

Editors’ and authors’ individual conflicts of interest disclosure and journal transparency. A cross-sectional study of high-impact medical specialty journals

Authors : Rafael Dal-Ré, Arthur L Caplan, Ana Marusic

Objective

To assess the fulfilment of authors’ and editors’ individual disclosure of potential conflicts of interest in a group of highly influential medicine journals across a variety of specialties.

Design

Cross-sectional analysis.

Setting and participants

Top-ranked five journals as per 2017 Journal Citation Report impact factor of 26 medical, surgery and imaging specialties.

Interventions

Observational analysis.

Primary and secondary outcome measures

Percentage of journals requiring disclosure of authors’ and editors’ individual potential conflicts of interest (CoI). Journals that were listed as followers of the International Committee of Medical Journal Editors (ICMJE) Recommendations, members of the Committee on Publication Ethics (COPE) and linked to a third party (ie, college, professional association/society, public institution).

Results

Although 99% (129/130) of journals required author’s CoI disclosure, only 12% (16/130) reported individual editors’ potential CoIs. Forty−five per cent (58/130) of journals were followers of the ICMJE Recommendations, and 73% (95/130) were COPE members. Most (69%; 90/130) were linked to a college, professional society/association or public institution. Only one journal did not have policies on individual authors’ and editors’ CoI disclosure.

Conclusion

Very few high-impact medical journals disclosed their editorial teams’ individual potential CoIs—conversely, almost all required disclosure of authors’ individual CoIs. Journal followers of the ICMJE Recommendations should regularly disclose the editors’ individual CoIs, as this is the only legitimate way to ask the same transparency of authors.

URL : Editors’ and authors’ individual conflicts of interest disclosure and journal transparency. A cross-sectional study of high-impact medical specialty journals

DOI : http://dx.doi.org/10.1136/bmjopen-2019-029796