Transparency in conducting and reporting research: A survey of authors, reviewers, and editors across scholarly disciplines

Authors : Mario Malički, IJsbrand Jan Aalbersberg, Lex Bouter, Adrian Mulligan, Gerben ter Riet

Calls have been made for improving transparency in conducting and reporting research, improving work climates, and preventing detrimental research practices. To assess attitudes and practices regarding these topics, we sent a survey to authors, reviewers, and editors. We received 3,659 (4.9%) responses out of 74,749 delivered emails.

We found no significant differences between authors’, reviewers’, and editors’ attitudes towards transparency in conducting and reporting research, or towards their perceptions of work climates. Undeserved authorship was perceived by all groups as the most prevalent detrimental research practice, while fabrication, falsification, plagiarism, and not citing prior relevant research, were seen as more prevalent by editors than authors or reviewers.

Overall, 20% of respondents admitted sacrificing the quality of their publications for quantity, and 14% reported that funders interfered in their study design or reporting. While survey respondents came from 126 different countries, due to the survey’s overall low response rate our results might not necessarily be generalizable.

Nevertheless, results indicate that greater involvement of all stakeholders is needed to align actual practices with current recommendations.

URL : Transparency in conducting and reporting research: A survey of authors, reviewers, and editors across scholarly disciplines

DOI : https://doi.org/10.1371/journal.pone.0270054

PreprintMatch: A tool for preprint to publication detection shows global inequities in scientific publication

Authors : Peter Eckmann, Anita Bandrowski

Preprints, versions of scientific manuscripts that precede peer review, are growing in popularity. They offer an opportunity to democratize and accelerate research, as they have no publication costs or a lengthy peer review process. Preprints are often later published in peer-reviewed venues, but these publications and the original preprints are frequently not linked in any way.

To this end, we developed a tool, PreprintMatch, to find matches between preprints and their corresponding published papers, if they exist. This tool outperforms existing techniques to match preprints and papers, both on matching performance and speed. PreprintMatch was applied to search for matches between preprints (from bioRxiv and medRxiv), and PubMed.

The preliminary nature of preprints offers a unique perspective into scientific projects at a relatively early stage, and with better matching between preprint and paper, we explored questions related to research inequity.

We found that preprints from low income countries are published as peer-reviewed papers at a lower rate than high income countries (39.6% and 61.1%, respectively), and our data is consistent with previous work that cite a lack of resources, lack of stability, and policy choices to explain this discrepancy.

Preprints from low income countries were also found to be published quicker (178 vs 203 days) and with less title, abstract, and author similarity to the published version compared to high income countries. Low income countries add more authors from the preprint to the published version than high income countries (0.42 authors vs 0.32, respectively), a practice that is significantly more frequent in China compared to similar countries.

Finally, we find that some publishers publish work with authors from lower income countries more frequently than others.

URL : PreprintMatch: A tool for preprint to publication detection shows global inequities in scientific publication

DOI : https://doi.org/10.1371/journal.pone.0281659

An open automation system for predatory journal detection

Authors : Li‑Xian Chen, Shih‑Wen Su, Chia‑Hung Liao, Kai‑Sin Wong, Shyan‑Ming Yuan

The growing number of online open-access journals promotes academic exchanges, but the prevalence of predatory journals is undermining the scholarly reporting process. Data collection, feature extraction, and model prediction are common steps in tools designed to distinguish between legitimate and predatory academic journals and publisher websites.

The authors include them in their proposed academic journal predatory checking (AJPC) system based on machine learning methods. The AJPC data collection process extracts 833 blacklists and 1213 whitelists information from websites to be used for identifying words and phrases that might indicate the presence of predatory journals.

Feature extraction is used to identify words and terms that help detect predatory websites, and the system’s prediction stage uses eight classification algorithms to distinguish between potentially predatory and legitimate journals.

We found that enhancing the classification efficiency of the bag of words model and TF-IDF algorithm with diff scores (a measure of differences in specific word frequencies between journals) can assist in identifying predatory journal feature words.

Results from performance tests suggest that our system works as well as or better than those currently being used to identify suspect publishers and publications.

The open system only provides reference results rather than absolute opinions and accepts user inquiries and feedback to update the system and optimize performance.

URL : An open automation system for predatory journal detection

DOI : https://doi.org/10.1038/s41598-023-30176-z

Gender inequality and self-publication are common among academic editors

Authors : Fengyuan Liu, Petter Holme, Matteo Chiesa, Bedoor AlShebli, Talal Rahwan

Scientific editors shape the content of academic journals and set standards for their fields. Yet, the degree to which the gender makeup of editors reflects that of scientists, and the rate at which editors publish in their own journals, are not entirely understood.

Here, we use algorithmic tools to infer the gender of 81,000 editors serving more than 1,000 journals and 15 disciplines over five decades. Only 26% of authors in our dataset are women, and we find even fewer women among editors (14%) and editors-in-chief (8%).

Career length explains the gender gap among editors, but not editors-in-chief. Moreover, by analysing the publication records of 20,000 editors, we find that 12% publish at least one-fifth, and 6% publish at least one-third, of their papers in the journal they edit.

Editors-in-chief tend to self-publish at a higher rate. Finally, compared with women, men have a higher increase in the rate at which they publish in a journal soon after becoming its editor.

URL : Gender inequality and self-publication are common among academic editors

DOI : https://doi.org/10.1038/s41562-022-01498-1

Characteristics of European Universities that Participate in Library Crowdfunding Initiatives for Open Access Monographs

Author : Mirela Roncevic

The aim of the study was to identify the traits of 100 European universities across 26 countries that did or did not support one particular library crowdfunding initiative for open access (OA) monographs over the past few years.

By relying on the rankings of four sources, including THE, ARWU, QS, and Leiden, the study identifies some of the traits of the universities that have shown strong interest in the model by already taking part in an established library crowdfunding initiative, as well as those that may play a vital role in its sustainability.

The study’s results show that the institutions that are likely to participate in library crowdfunding initiatives for OA monographs may be defined as highly ranked and produce research in quantity, quantity, relevance, and timeliness. The study’s key revelation is the high academic standing of the institutions that rarely participate in one crowdfunding initiative.

These institutions may not be as “international” in their outlooks, but they stand out for their high-quality and significant research output. As such, they may accelerate the model’s adoption with more consistent participation in library crowdfunding.

URL : Characteristics of European Universities that Participate in Library Crowdfunding Initiatives for Open Access Monographs

DOI : https://doi.org/10.3390/publications11010009

Factors that affect scientific publication in Africa—A gender perspective

Authors : Catherine Beaudry, Heidi Prozesky, Carl St-Pierre, Seyed Reza Mirnezami

A large body of literature on gender differences in scientific publication output has clearly established that women scientists publish less that men do. Yet, no single explanation or group of explanations satisfactorily accounts for this difference, which has been called the “productivity puzzle”.

To provide a more refined portrait of the scientific publication output of women in relation to that of their male peers, we conducted a web-based survey in 2016 of individual researchers across all African countries, except Libya.

The resulting 6,875 valid questionnaires submitted by respondents in the STEM, Health Science and SSH fields were analyzed using multivariate regressions on the self-reported number of articles published in the preceding 3 years. Controlling for a variety of variables including career stage, workload, mobility, research field, and collaboration, we measured the direct and moderating effect of gender on scientific production of African researchers.

Our results show that, while women’s scientific publication output is positively affected by collaboration and age (impediments to women’s scientific output decrease later in their careers), it is negatively impacted by care-work and household chores, limited mobility, and teaching hours.

Women are as prolific when they devote the same hours to other academic tasks and raise the same amount of research funding as their male colleagues.

Our results lead us to argue that the standard academic career model, relying on continuous publications and regular promotions, assumes a masculine life cycle that reinforces the general perception that women with discontinuous careers are less productive than their male colleagues, and systematically disadvantages women.

We conclude that the solution resides beyond women’s empowerment, i.e., in the broader institutions of education and the family, which have an important role to play in fostering men’s equal contribution to household chores and care-work.

URL : Factors that affect scientific publication in Africa—A gender perspective

DOI : https://doi.org/10.3389/frma.2023.1040823

The pandemic and changes in early career researchers’ career prospects, research and publishing practices

Authors : Hamid R. Jamali, David Nicholas, David Sims, Anthony Watkinson, Eti Herman, Cherifa Boukacem-Zeghmouri, Blanca Rodrıguez-Bravo, Marzena Świgoń, Abdullah Abrizah, Jie Xu, Carol Tenopir , Suzie Allard

Introduction

As part of the Harbnger-2 project, this study aimed to discover the impact of the COVID-19 pandemic on junior researchers’ work-life, career prospects, research and publishing practices and networking.

Methods

An online international survey of 800 early career researchers (ECRs) was conducted in 2022. A questionnaire was developed based on three rounds of interviews and distributed using multiple channels including publishers, social media, and direct email to ECRs.

Results

The impact of the pandemic on career prospects, morale, job security, productivity, ability to network and collaborate, and quality and speed of peer review has on the whole been more negative than positive.

A quarter of ECRs shifted their research focus to pandemic-related topics and half of those who did, benefited largely due to increased productivity and impact. The majority worked remotely/from home and more than two-thirds of those who did so benefitted from it. While virtual or hybrid conferences have been embraced by the majority of ECRs, around a third still preferred face-to-face only conferences.

The use of library online platforms, Sci-Hub, ResearchGate, Google Scholar and smartphone to search and access full-text papers increased. ECRs prioritised journals with fast submission procedures for the publishing of their papers and spent more time on increasing the visibility of their research. Fees were a problem for publishing open access.

Conclusion

Although, generally, the pandemic negatively impacted many aspects of ECRs’ work-life, certain research areas and individuals benefited from being more appreciated and valued, and, in some cases, resulted in increased resources, better productivity and greater impact.

Changes, such as the use of digital technologies and remote working created new opportunities for some ECRs. While continuing work flexibility and hybrid conferences might benefit some ECRs, institutions should also take measures to help those ECRs whose career and productivity have been adversely impacted.

URL : The pandemic and changes in early career researchers’ career prospects, research and publishing practices

DOI : https://doi.org/10.1371/journal.pone.0281058