Archives des mots-clés : scientific communication

Extracting Core Claims from Scientific Articles

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Authors : Tom Jansen, Tobias Kuhn

The number of scientific articles has grown rapidly over the years and there are no signs that this growth will slow down in the near future. Because of this, it becomes increasingly difficult to keep up with the latest developments in a scientific field.

To address this problem, we present here an approach to help researchers learn about the latest developments and findings by extracting in a normalized form core claims from scientific articles.

This normalized representation is a controlled natural language of English sentences called AIDA, which has been proposed in previous work as a method to formally structure and organize scientific findings and discourse.

We show how such AIDA sentences can be automatically extracted by detecting the core claim of an article, checking for AIDA compliance, and – if necessary – transforming it into a compliant sentence.

While our algorithm is still far from perfect, our results indicate that the different steps are feasible and they support the claim that AIDA sentences might be a promising approach to improve scientific communication in the future.

URL : https://arxiv.org/abs/1707.07678

Against capital

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Author : Stuart Lawson

The ways in which scholars exchange and share their work have evolved through pragmatic responses to the political and economic contexts in which they are embedded.

So rather than being designed to fulfil their function in an optimal way, our methods of scholarly communication have been distorted by the interests of capital and by neoliberal logic.

If these two interlinked political forces – that suffuse all aspects of our lives – are the reason for the mess we are currently in, then surely any alternative scholarly communication system we create should be working against them, not with them. The influence of capital in scholarly publishing, and the overwhelming force of neoliberalism in our working practices, is the problem.

So when the new ‘innovative disrupters’ are fully aligned with the political forces that need to be dismantled, it is questionable that the new way of doing things is a significant improvement.

URL : http://stuartlawson.org/2017/07/against-capital/

 

A multi-disciplinary perspective on emergent and future innovations in peer review

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Authors : Jonathan P. Tennant, Jonathan M. Dugan, Daniel Graziotin, Damien C. Jacques, François Waldner, Daniel Mietchen, Yehia Elkhatib, Lauren B. Collister, Christina K. Pikas, Tom Crick, Paola Masuzzo, Anthony Caravaggi, Devin R. Berg, Kyle E. Niemeyer, Tony Ross-Hellauer, Sara Mannheimer, Lillian Rigling, Daniel S. Kat, Bastian Greshake Tzovaras, Josmel Pacheco-Mendoza, Nazeefa Fatima, Marta Poblet, Marios Isaakidis, Dasapta Erwin Irawan, Sébastien Renaut, Christopher R. Madan, Lisa Matthias, Jesper Nørgaard Kjær, Daniel Paul O’Donnell, Cameron Neylon, Sarah Kearns, Manojkumar Selvaraju, Julien Colomb

Peer review of research articles is a core part of our scholarly communication system. In spite of its importance, the status and purpose of peer review is often contested. What is its role in our modern digital research and communications infrastructure?

Does it perform to the high standards with which it is generally regarded? Studies of peer review have shown that it is prone to bias and abuse in numerous dimensions, frequently unreliable, and can fail to detect even fraudulent research.

With the advent of Web technologies, we are now witnessing a phase of innovation and experimentation in our approaches to peer review. These developments prompted us to examine emerging models of peer review from a range of disciplines and venues, and to ask how they might address some of the issues with our current systems of peer review.

We examine the functionality of a range of social Web platforms, and compare these with the traits underlying a viable peer review system: quality control, quantified performance metrics as engagement incentives, and certification and reputation.

Ideally, any new systems will demonstrate that they out-perform current models while avoiding as many of the biases of existing systems as possible. We conclude that there is considerable scope for new peer review initiatives to be developed, each with their own potential issues and advantages.

We also propose a novel hybrid platform model that, at least partially, resolves many of the technical and social issues associated with peer review, and can potentially disrupt the entire scholarly communication system.

Success for any such development relies on reaching a critical threshold of research community engagement with both the process and the platform, and therefore cannot be achieved without a significant change of incentives in research environments.

URL : A multi-disciplinary perspective on emergent and future innovations in peer review

DOI : http://dx.doi.org/10.12688/f1000research.12037.1

 

Journal Data Sharing Policies and Statistical Reporting Inconsistencies in Psychology

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Authors : Michele Nuijten, Jeroen Borghuis, Coosje Veldkamp, Linda Alvarez, Marcel van Assen, Jelte Wicherts

In this paper, we present three studies that investigate the relation between data sharing and statistical reporting inconsistencies. Previous research found that reluctance to share data was related to a higher prevalence of statistical errors, often in the direction of statistical significance (Wicherts, Bakker, & Molenaar, 2011).

We therefore hypothesized that journal policies about data sharing and data sharing itself would reduce these inconsistencies. In Study 1, we compared the prevalence of reporting inconsistencies in two similar journals on decision making with different data sharing policies.

In Study 2, we compared reporting inconsistencies in articles published in PLOS (with a data sharing policy) and Frontiers in Psychology (without a data sharing policy). In Study 3, we looked at papers published in the journal Psychological Science to check whether papers with or without an Open Practice Badge differed in the prevalence of reporting errors.

Overall, we found no relationship between data sharing and reporting inconsistencies. We did find that journal policies on data sharing are extremely effective in promoting data sharing.

We argue that open data is essential in improving the quality of psychological science, and we discuss ways to detect and reduce reporting inconsistencies in the literature.

DOI : https://dx.doi.org/10.17605/OSF.IO/SGBTA

Sci-Hub provides access to nearly all scholarly literature

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Authors : Daniel S. Himmelstein, Ariel R. Romero, Bastian Greshake Tzovaras, Casey S. Greene

The website Sci-Hub provides access to scholarly literature via full text PDF downloads. The site enables users to access articles that would otherwise be paywalled. Since its creation in 2011, Sci-Hub has grown rapidly in popularity.

However, until now, the extent of Sci-Hub’s coverage was unclear. As of March 2017, we find that Sci-Hub’s database contains 68.9% of all 81.6 million scholarly articles, which rises to 85.2% for those published in closed access journals.

Furthermore, Sci-Hub contains 77.0% of the 5.2 million articles published by inactive journals. Coverage varies by discipline, with 92.8% coverage of articles in chemistry journals compared to 76.3% for computer science.

Coverage also varies by publisher, with the coverage of the largest publisher, Elsevier, at 97.3%. Our interactive browser at greenelab.github.io/scihub allows users to explore these findings in more detail.

Finally, we estimate that over a six month period in 2015–2016, Sci-Hub provided access for 99.3% of valid incoming requests. Hence, the scope of this resource suggests the subscription publishing model is becoming unsustainable. For the first time, the overwhelming majority of scholarly literature is available gratis to anyone.

URL : https://greenelab.github.io/scihub-manuscript/

 

Medical Theses and Derivative Articles: Dissemination Of Contents and Publication Patterns

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Authors : Mercedes Echeverria, David Stuart, Tobias Blanke

Doctoral theses are an important source of publication in universities, although little research has been carried out on the publications resulting from theses, on so-called derivative articles.

This study investigates how derivative articles can be identified through a text analysis based on the full-text of a set of medical theses and the full-text of articles, with which they shared authorship.

The text similarity analysis methodology applied consisted in exploiting the full-text articles according to organization of scientific discourse (IMRaD) using the TurnItIn plagiarism tool.

The study found that the text similarity rate in the Discussion section can be used to discriminate derivative articles from non-derivative articles.

Additional findings were: the first position of the thesis’s author dominated in 85% of derivative articles, the participation of supervisors as coauthors occurred in 100% of derivative articles, the authorship credit retained by the thesis’s author was 42% in derivative articles, the number of coauthors by article was 5 in derivative articles versus 6.4 coauthors, as average, in non-derivative articles and the time differential regarding the year of thesis completion showed that 87.5% of derivative articles were published before or in the same year of thesis completion.

URL : https://arxiv.org/abs/1707.04439