Data objects and documenting scientific processes: An analysis of data events in biodiversity data papers

Authors : Kai Li, Jane Greenberg, Jillian Dunic

The data paper, an emerging scholarly genre, describes research datasets and is intended to bridge the gap between the publication of research data and scientific articles. Research examining how data papers report data events, such as data transactions and manipulations, is limited.

The research reported on in this paper addresses this limitation and investigated how data events are inscribed in data papers. A content analysis was conducted examining the full texts of 82 data papers, drawn from the curated list of data papers connected to the Global Biodiversity Information Facility (GBIF).

Data events recorded for each paper were organized into a set of 17 categories. Many of these categories are described together in the same sentence, which indicates the messiness of data events in the laboratory space.

The findings challenge the degrees to which data papers are a distinct genre compared to research papers and they describe data-centric research processes in a through way.

This paper also discusses how our results could inform a better data publication ecosystem in the future.

URL : Data objects and documenting scientific processes: An analysis of data events in biodiversity data papers

Alternative location : https://arxiv.org/abs/1903.06215

Potential predatory journals are colonizing the ICMJE recommendations list of followers

Authors : Dal-Ré R., Marušić A.

BACKGROUND

The International Committee of Medical Journal Editors (ICMJE) has expressed its concerns about predatory journals using the list of ICMJE Recommendations (ICMJE-R) followers to “gain the appearance of legitimacy.”

We assessed the presence of potential predatory journals on the ICMJE-R list and their adherence to ICMJE recommendations.

METHODS

A random sample of 350 journals from the estimated 3,100-3,200 biomedical journals listed as ICMJE-R followers was chosen. Data collected from the ICMJE and journal webpages in English were: adherence to six ICMJE-R policies/requirements, year of journal’s listing as ICMJE-R follower, discipline covered, publisher and its country of origin and existence of article processing charge.

Potential predatory journal was considered as one open access journal not being a member of a recognized listing in COPE, DOAJ, OASPA, AJOL and/or INASP.

RESULTS

Thirty-one percent of journals were considered to be potentially predatory; 94% of them were included in the ICMJE-R list in 2014-2018. Half were published in the United States and 62% were devoted to medicine.

Adherence to five of the six policies/requirements was infrequent, ranging from 51% (plagiarism) to 7% (trial registration). Seventy-two percent of journals mentioned a policy on authors’ conflicts of interest. Information on article processing charge was available for 76% journals and could not be found for 22%.

Authorship policy/ instructions were significantly more present in journals with publishers from India than from the USA (53% vs 30%; p = 0.047), with no differences in the other five policies.

CONCLUSION

Predatory journals should be deleted from the ICMJE-R list of followers to prevent misleading authors. ICMJE-R following journals need to be reevaluated with pre-defined published criteria.

URL : http://www.njmonline.nl/getpdf.php?id=2093

A cross sectional study of retraction notices of scholarly journals of science

Authors : Manorama Tripathi, Sharad Kumar Sonkar, Sunil Kumar

Retraction is the withdrawal of published article after it is found that the authors did not ensure integrity in conducting and reporting their research activities. The bibliometric information of 4716 document categorised as retractions in Science Citation Index, Web of Science was downloaded and analysed to understand trend, pattern and reasons of retraction.

The results showed that retractions had increased during the ten-year period, 2008-2017. The main reasons for retractions were plagiarism, falsified data, manipulation of images and figures. It was also found that just 40 out of 4716 retraction notices had explicitly stated reasons for retracting the published articles.

The open access journals had more number of retractions as compared to subscription based journals. The study will guide library professionals and research scholars towards a better comprehension of the reasons behind retractions in science discipline in the ten-year period.

They would be better equipped to steer clear of inauthentic publications in their citations and references.

URL : A cross sectional study of retraction notices of scholarly journals of science

Alternative location : http://publications.drdo.gov.in/ojs/index.php/djlit/article/view/14000

Ten myths around open scholarly publishing

Authors : Jonathan P Tennant​​​, Harry Crane​​, Tom Crick​​, Jacinto Davila​, Asura Enkhbayar​​, Johanna Havemann​​, Bianca Kramer​​, Ryan Martin​​, Paola Masuzzo​​, Andy Nobes​​, Curt Rice​​, Bárbara R López​​, Tony Ross-Hellauer​​, Susanne Sattler​​, Paul Thacker​​, MarcVanholsbeeck

The changing world of scholarly communication and the emergence of ‘Open Science’ or ‘Open Research’ has brought to light a number of controversial and hotly-debated topics.

Yet, evidence-based rational debate is regularly drowned out by misinformed or exaggerated rhetoric, which does not benefit the evolving system of scholarly communication.

The aim of this article is to provide a baseline evidence framework for ten of the most contested topics, in order to help frame and move forward discussions, practices and policies. We address preprints and scooping, the practice of copyright transfer, the function of peer review, and the legitimacy of ‘global’ databases.

The presented facts and data will be a powerful tool against misinformation across wider academic research, policy and practice, and may be used to inform changes within the rapidly evolving scholarly publishing system.

URL : Ten myths around open scholarly publishing

DOI : https://doi.org/10.7287/peerj.preprints.27580v1

Sci-Hub, a challenge for academic and research libraries

Authors : Llarina González-Solar, Viviana Fernández-Marcial

Sci-Hub emerged into the field of scientific communication in 2011 as a platform for free access to scientific papers. It is the most popular of the so-called shadow libraries, systems that overcome the limits of legal access to scientific publications, standing apart from the open access movement.

Besides from the media coverage that has served to boost its popularity, several studies reveal the impact of Sci-Hub among researchers, who have embraced this initiative. Sci-Hub has revealed new forms of access to scientific information, affecting academic and research libraries that cannot remain on the sidelines.

This study addresses the Sci-Hub phenomenon and its implications for academic and research libraries from different points of view, through a bibliographic review and an analysis of examples of action.

URL : http://hdl.handle.net/10760/34165

Can Google Scholar and Mendeley help to assess the scholarly impacts of dissertations?

Authors : Kayvan Kousha, Mike Thelwall

Dissertations can be the single most important scholarly outputs of junior researchers. Whilst sets of journal articles are often evaluated with the help of citation counts from the Web of Science or Scopus, these do not index dissertations and so their impact is hard to assess.

In response, this article introduces a new multistage method to extract Google Scholar citation counts for large collections of dissertations from repositories indexed by Google.

The method was used to extract Google Scholar citation counts for 77,884 American doctoral dissertations from 2013-2017 via ProQuest, with a precision of over 95%. Some ProQuest dissertations that were dual indexed with other repositories could not be retrieved with ProQuest-specific searches but could be found with Google Scholar searches of the other repositories.

The Google Scholar citation counts were then compared with Mendeley reader counts, a known source of scholarly-like impact data. A fifth of the dissertations had at least one citation recorded in Google Scholar and slightly fewer had at least one Mendeley reader.

Based on numerical comparisons, the Mendeley reader counts seem to be more useful for impact assessment purposes for dissertations that are less than two years old, whilst Google Scholar citations are more useful for older dissertations, especially in social sciences, arts and humanities.

Google Scholar citation counts may reflect a more scholarly type of impact than that of Mendeley reader counts because dissertations attract a substantial minority of their citations from other dissertations.

In summary, the new method now makes it possible for research funders, institutions and others to systematically evaluate the impact of dissertations, although additional Google Scholar queries for other online repositories are needed to ensure comprehensive coverage.

URL : https://arxiv.org/abs/1902.08746

Who Is (Likely) Peer-Reviewing Your Papers? A Partial Insight into the World’s Top Reviewers

Authors : Francesco Pomponi, Bernardino D’Amico, Tom Rye

Scientific publishing is experiencing unprecedented growth in terms of outputs across all fields. Inevitably this creates pressure throughout the system on a number of entities.

One key element is represented by peer-reviewers, whose demand increases at an even higher pace than that of publications, since more than one reviewer per paper is needed and not all papers that get reviewed get published.

The relatively recent Publons platform allows for unprecedented insight into the usual ‘blindness’ of the peer-review system. At a time where the world’s top peer-reviewers are announced and celebrated, we have taken a step back in order to attempt a partial mapping of their profiles to identify trends and key dimensions of this community of ‘super-reviewers’.

This commentary focuses necessarily on a limited sample due to manual processing of data, which needs to be done within a single day for the type of information we seek. In investigating the numbers of performed reviews vs. academic citations, our analysis suggests that most reviews are carried out by relatively inexperienced academics.

For some of these early career academics, peer-reviewing seems to be the only activity they engage with, given the high number of reviews performed (e.g., three manuscripts per day) and the lack of outputs (zero academic papers and citations in some cases). Additionally, the world’s top researchers (i.e., highly-cited researchers) are understandably busy with research activities and therefore far less active in peer-reviewing.

Lastly, there seems to be an uneven distribution at a national level between scientific outputs (e.g., publications) and reviews performed. Our analysis contributes to the ongoing global discourse on the health of scientific peer-review, and it raises some important questions for further discussion.

URL : Who Is (Likely) Peer-Reviewing Your Papers? A Partial Insight into the World’s Top Reviewers

URL : https://www.mdpi.com/2304-6775/7/1/15