The effect of bioRxiv preprints on citations and altmetrics

Authors : Nicholas Fraser, Fakhri Momeni, Philipp Mayr, Isabella Peters

A potential motivation for scientists to deposit their scientific work as preprints is to enhance its citation or social impact, an effect which has been empirically observed for preprints in physics, astronomy and mathematics deposited to arXiv. In this study we assessed the citation and altmetric advantage of bioRxiv, a preprint server for the biological sciences.

We retrieved metadata of all bioRxiv preprints deposited between November 2013 and December 2017, and matched them to articles that were subsequently published in peer-reviewed journals. Citation data from Scopus and altmetric data from Altmetric.com were used to compare citation and online sharing behaviour of bioRxiv preprints, their related journal articles, and non-deposited articles published in the same journals.

We found that bioRxiv-deposited journal articles received a sizeable citation and altmetric advantage over non-deposited articles. Regression analysis reveals that this advantage is not explained by multiple explanatory variables related to the article and its authorship.

bioRxiv preprints themselves are being directly cited in journal articles, regardless of whether the preprint has been subsequently published in a journal. bioRxiv preprints are also shared widely on Twitter and in blogs, but remain relatively scarce in mainstream media and Wikipedia articles, in comparison to peer-reviewed journal articles.

URL : https://www.biorxiv.org/content/10.1101/673665v1

Library Subscriptions and Open Access: Highlights from the University of California Negotiations with Elsevier

Authors : Cory Tucker, Andrea Wirth, Annette Day

On February 28, 2019, the University of California (UC) System announced the cancellation of their $50 million journal subscription deal with Elsevier. The impetus behind the UC decision comes from two issues.

Firstly, the increasing costs of journal subscriptions in a landscape where library budgets remain flat. Secondly, the effort to shift the journal publishing model away from subscriptions to a sustainable open access model.

The following paper will provide background on issues with the scholarly communication process, academic library budgets and open access initiatives. Additional information will focus on the impact of journal subscription deals with large commercial publishers (including Elsevier) and highlight UNLV efforts to support open access.

URL : https://digitalscholarship.unlv.edu/lib_articles/653/

Open access policies of leading medical journals: a cross-sectional study

Authors : Tim S Ellison, Laura Schmidt, Amy Williams, Christopher C Winchester

Objectives

Academical and not-for-profit research funders are increasingly requiring that the research they fund must be published open access, with some insisting on publishing with a Creative Commons Attribution (CC BY) licence to allow the broadest possible use.

We aimed to clarify the open access variants provided by leading medical journals and record the availability of the CC BY licence for commercially funded research.

Methods

We identified medical journals with a 2015 impact factor of ≥15.0 on 24 May 2017, then excluded from the analysis journals that only publish review articles. Between 29 June 2017 and 26 July 2017, we collected information about each journal’s open access policies from their websites and/or by email contact.

We contacted the journals by email again between 6 December 2017 and 2 January 2018 to confirm our findings.

Results

Thirty-five medical journals publishing original research from 13 publishers were included in the analysis. All 35 journals offered some form of open access allowing articles to be free-to-read, either immediately on publication or after a delay of up to 12 months.

Of these journals, 21 (60%) provided immediate open access with a CC BY licence under certain circumstances (eg, to specific research funders). Of these 21, 20 only offered a CC BY licence to authors funded by non-commercial organisations and one offered this option to any funder who required it.

Conclusions

Most leading medical journals do not offer to authors reporting commercially funded research an open access licence that allows unrestricted sharing and adaptation of the published material.

The journals’ policies are therefore not aligned with open access declarations and guidelines. Commercial research funders lag behind academical funders in the development of mandatory open access policies, and it is time for them to work with publishers to advance the dissemination of the research they fund.

URL : Open access policies of leading medical journals: a cross-sectional study

DOI : http://dx.doi.org/10.1136/bmjopen-2018-028655

“Blacklists” and “whitelists” to tackle predatory publishing : A cross-sectional comparison and thematic analysis

Authors : Michaela Strinzel​, Anna Severin, Katrin Milzow, Matthias Egger

Background

Despite growing awareness of predatory publishing and research on its market characteristics, the defining attributes of fraudulent journals remain controversial.

We aimed to develop a better understanding of quality criteria for scholarly journals by analysing journals and publishers indexed in blacklists of predatory journals and whitelists of legitimate journals and the lists’ inclusion criteria.

Methods

We searched for blacklists and whitelists in early 2018. Lists that included journals across disciplines were eligible. We used a mixed methods approach, combining quantitative and qualitative analyses.

To quantify overlaps between lists in terms of indexed journals and publishers we employed the Jaro-Winkler string metric and Venn diagrams. To identify topics addressed by the lists’ inclusion criteria and to derive their broader conceptual categories, we used a qualitative coding approach.

Results

Two blacklists (Beall’s and Cabell’s) and two whitelists (DOAJ and Cabell’s) were eligible. The number of journals per list ranged from 1404 to 12357 and the number of publishers from 473 to 5638. Seventy-three journals and 42 publishers were included both in a blacklist and whitelist. A total of 198 inclusion criteria were examined.

Seven thematic themes were identified: (i) peer review, (ii) editorial services, (iii) policy, (iv) business practices, (v) publishing, archiving and access, (vi) website and (vii) indexing and metrics.

Business practices accounted for almost half of blacklists’ criteria, whereas whitelists gave more emphasis to criteria related to policy and guidelines. Criteria were grouped into four broad concepts: (i) transparency, (ii) ethics, (iii) professional standards and (iv) peer review and other services.

Whitelists gave more weight to transparency whereas blacklists focused on ethics and professional standards. The criteria included in whitelists were easier to verify than those used in blacklists. Both types of list gave relatively little emphasis to the quality of peer review.

Conclusions

There is overlap between journals and publishers included in blacklists and whitelists. Blacklists and whitelists differ in their criteria for quality and the weight given to different dimensions of quality. Aspects that are central but difficult to verify receive insufficient attention.

URL : “Blacklists” and “whitelists” to tackle predatory publishing : A cross-sectional comparison and thematic analysis

DOI : https://doi.org/10.7287/peerj.preprints.27532v1

Ten years of AoB PLANTS the open access journal for plant scientists: inception and progress since 2009

Author : Michael B Jackson

AoB PLANTS is a not-for-profit, open access, plant science journal and one of three peer-reviewed journals owned and managed by the Annals of Botany Company. This article explains events and thinking that led to the starting of AoB PLANTS and how the unique features of the Journal came to be formalized prior to its launch in September 2009.

The article also describes how the Journal’s management developed over the first 10 years and summarizes the Journal’s achievements in a decade where open access journals have proliferated despite subscription journals continuing to dominate the publishing of peer-reviewed botanical science.

URL : Ten years of AoB PLANTS the open access journal for plant scientists: inception and progress since 2009

DOI : https://doi.org/10.1093/aobpla/plz025

Access to Top-Cited Emergency Care Articles (Published Between 2012 and 2016) Without Subscription

Authors : Murad Al Hamzy, Dominique de Villiers, Megan Banner, Hein Lamprecht, Stevan R. Bruijns

Introduction

Unrestricted access to journal publications speeds research progress, productivity, and knowledge translation, which in turn develops and promotes the efficient dissemination of content.

We describe access to the 500 most-cited emergency medicine (EM) articles (published between 2012 and 2016) in terms of publisher-based access (open access or subscription), alternate access routes (self-archived or author provided), and relative cost of access.

Methods

We used the Scopus database to identify the 500 most-cited EM articles published between 2012 and 2016. Access status was collected from the journal publisher. For studies not available via open access, we searched on Google, Google Scholar, Researchgate, Academia.edu, and the Unpaywall and Open Access Button browser plugins to locate self archived copies.

We contacted corresponding authors of the remaining inaccessible studies for a copy of each of their articles. We collected article processing and access costs from the journal publishers, and then calculated relative cost differences using the World Bank purchasing power parity index for the United States (U.S.), Germany, Turkey, China, Brazil, South Africa, and Australia.

This allows costs to be understood relative to the economic context of the countries from which they originated.

Results

We identified 500 articles for inclusion in the study. Of these, 167 (33%) were published in an open access format. Of the remaining 333 (67%), 204 (61%) were available elsewhere on the internet, 18 (4%) were provided by the authors, and 111 (22%) were accessible by subscription only.

The mean article processing and access charges were $2,518.62 and $44.78, respectively. These costs were 2.24, 1.75, 2.28 and 1.56 times more expensive for South African, Chinese, Turkish, and Brazilian authors, respectively, than for U.S. authors (p<0.001 all).

Conclusion

Despite the advantage of open access publication for knowledge translation, social responsibility, and increased citation, one in five of the 500 EM articles were accessible only via subscription. Access for scientists from upper-middle income countries was significantly hampered by cost.

It is important to acknowledge the value this has for authors from low- and middle-income countries. Authors should also consider the citation advantage afforded by open access publishing when deciding where to publish.

URL : Access to Top-Cited Emergency Care Articles (Published Between 2012 and 2016) Without Subscription

DOI : https://doi.org/10.5811/westjem.2019.2.40957

Altruism or Self-Interest? Exploring the Motivations of Open Access Authors

Authors : Robert Heaton, Dylan Burns, Becky Thoms

More than 250 authors at Utah State University published an Open Access (OA) article in 2016. Analysis of survey results and publication data from Scopus suggests that the following factors led authors to choose OA venues: ability to pay publishing charges, disciplinary colleagues’ positive attitudes toward OA, and personal feelings such as altruism and desire to reach a wide audience.

Tenure status was not an apparent factor. This article adds to the body of literature on author motivations and can inform library outreach and marketing efforts, the creation of new publishing models, and the conversation about the larger scholarly publishing landscape.

URL : Altruism or Self-Interest? Exploring the Motivations of Open Access Authors

DOI : https://doi.org/10.5860/crl.80.4.485