EN

Preprints in Chemistry: An Exploratory Analysis of Differences with Journal Articles

Posted on by Hans Dillaerts

Author : Mario Pagliaro

The exploratory analysis of the differences between preprints and the corresponding peer reviewed journal articles for ten studies first published on ChemRxiv and on Preprints, though statistically non-significant, suggests outcomes of relevance for chemistry researchers and educators.

The full transition to open science requires new education of doctoral students and young researchers on scholarly communication in the digital age.

The preliminary findings of this study will contribute to inform the curriculum of the aforementioned new courses for young chemists, eventually promoting accelerated innovation in a science that, unique amid all basic sciences, originates a huge industry central to the wealth of nations.

URL : Preprints in Chemistry: An Exploratory Analysis of Differences with Journal Articles

DOI : https://doi.org/10.3390/publications9010005

EN

Tracing the context in disciplinary classifications: A bibliometric pairwise comparison of five classifications of journals in the social sciences and humanities

Posted on by Hans Dillaerts

Authors : Linda Sīle, Raf Guns, Frédéric Vandermoere, Gunnar Sivertsen, Tim C. E. Engels

Despite the centrality of disciplinary classifications in bibliometric analyses, it is not well known how the choice of disciplinary classification influences bibliometric representations of research in the social sciences and humanities (SSH).

This is especially crucial when using data from national databases. Therefore, we examine the differences in the disciplinary profile of an article along with the absolute and relative number of articles across disciplines using five disciplinary classifications for journals. We use data on journal articles (2006–2015) from the national bibliographic databases VABB-SHW in Flanders (Belgium) and Cristin in Norway.

Our study is based on pairwise comparisons of the local classifications used in these databases, the Web of Science subject categories, the Science-Metrix, and the ERIH PLUS journal classifications.

For comparability, all classifications are mapped to the OECD Fields of Research and Development classification. The findings show that the choice of disciplinary classification can lead to over- or underestimation of the absolute number of publications per discipline.

In contrast, if the focus is on the relative numbers, the choice of classification has practically no influence. These findings facilitate an informed choice of a disciplinary classification for journals in SSH when using data from national databases.

DOI : https://doi.org/10.1162/qss_a_00110

EN

Opening up the Library: Transforming our Policies, Practices and Structures

Posted on by Hans Dillaerts

Authors : Joanna Ball, Graham Stone, Sarah Thompson

Momentum is building in the transition to open access for monographs, with a number of funders developing policies and mandates in recent years.

The article argues that while libraries play an instrumental role in driving a transition to open science within their institutions this is not reflected in libraries’ approaches to collection development, which are still predicated on purchased content.

Libraries are keen to demonstrate that their purchased content is relevant to users, often promoting ‘expensive’ purchased collections over open content. Rather than relegating open to a less-visible second place, the article calls for libraries to acquire and promote open content alongside, and where appropriate with higher priority, than paid-for content.

In order to facilitate a transition to open access for monographs, cultural change and leadership is required within libraries to reimagine themselves around open content as the norm, with policies, practices and structures that communicate, enable and promote this shift. The article calls for a collaborative international approach.

URL : Opening up the Library: Transforming our Policies, Practices and Structures

Original location : https://www.liberquarterly.eu/article/10.18352/lq.10360/

FR

OAI-PMH à « l’heure du web sémantique » : bilans et perspectives

Posted on by Hans Dillaerts

Auteur/Author : Vincent de Lavenne de la Montoise

À l’approche du vingtième anniversaire du protocole OAI-PMH, et dans un environnement web qui a subi de profondes évolutions (technologiques et d’usages), quelle est l’actualité de l’échange de données ? Comment se sont construits les usages des professionnel le s en la matière ? Sont ils adaptés aux défis actuels ?

Ce travail se propose d’analyser l’exposition et l’échange de données sous un angle historique, avant d’essayer de comprendre les enjeux actuels qui détermineront quelle(s) solution(s) techniques choisir.

URL : OAI-PMH à « l’heure du web sémantique » : bilans et perspectives

Original location : https://www.enssib.fr/bibliotheque-numerique/documents/69909-oai-pmh-a-l-heure-du-web-semantique.pdf

EN

Preprints in motion: tracking changes between posting and journal publication

Posted on by Hans Dillaerts

Authors : Jessica K Polka, Gautam Dey, Máté Pálfy, Federico Nanni, Liam Brierley, Nicholas Fraser, Jonathon Alexis Coates

Amidst the COVID-19 pandemic, preprints in the biomedical sciences are being posted and accessed at unprecedented rates, drawing widespread attention from the general public, press and policymakers for the first time.

This phenomenon has sharpened longstanding questions about the reliability of information shared prior to journal peer review. Does the information shared in preprints typically withstand the scrutiny of peer review, or are conclusions likely to change in the version of record?

We assessed preprints that had been posted and subsequently published in a journal between 1st January and 30th April 2020, representing the initial phase of the pandemic response. We utilised a combination of automatic and manual annotations to quantify how an article changed between the preprinted and published version.

We found that the total number of figure panels and tables changed little between preprint and published articles. Moreover, the conclusions of 6% of non-COVID-19-related and 15% of COVID-19-related abstracts undergo a discrete change by the time of publication, but the majority of these changes do not reverse the main message of the paper.

DOI : https://doi.org/10.1101/2021.02.20.432090

EN

Repository Approaches to Improving the Quality of Shared Data and Code

Posted on by Hans Dillaerts

Authors : Ana Trisovic, Katherine Mika, Ceilyn Boyd, Sebastian Feger, Mercè Crosas

Sharing data and code for reuse has become increasingly important in scientific work over the past decade. However, in practice, shared data and code may be unusable, or published results obtained from them may be irreproducible.

Data repository features and services contribute significantly to the quality, longevity, and reusability of datasets.

This paper presents a combination of original and secondary data analysis studies focusing on computational reproducibility, data curation, and gamified design elements that can be employed to indicate and improve the quality of shared data and code.

The findings of these studies are sorted into three approaches that can be valuable to data repositories, archives, and other research dissemination platforms.

URL : Repository Approaches to Improving the Quality of Shared Data and Code

DOI : https://doi.org/10.3390/data6020015

EN

Managing an institutional repository workflow with GitLab and a folder-based deposit system

Posted on by Hans Dillaerts

Authors : Whitney R. Johnson-Freeman, Mark E. Phillips, Kristy K. Phillips

Institutional Repositories (IR) exist in a variety of configurations and in various states of development across the country. Each organization with an IR has a workflow that can range from explicitly documented and codified sets of software and human workflows, to ad hoc assortments of methods for working with faculty to acquire, process and load items into a repository.

The University of North Texas (UNT) Libraries has managed an IR called UNT Scholarly Works for the past decade but has until recently relied on ad hoc workflows. Over the past six months, we have worked to improve our processes in a way that is extensible and flexible while also providing a clear workflow for our staff to process submitted and harvested content.

Our approach makes use of GitLab and its associated tools to track and communicate priorities for a multi-user team processing resources. We paired this Web-based management with a folder-based system for moving the deposited resources through a sequential set of processes that are necessary to describe, upload, and preserve the resource.

This strategy can be used in a number of different applications and can serve as a set of building blocks that can be configured in different ways. This article will discuss which components of GitLab are used together as tools for tracking deposits from faculty as they move through different steps in the workflow.

Likewise, the folder-based workflow queue will be presented and described as implemented at UNT, and examples for how we have used it in different situations will be presented.

URL : https://journal.code4lib.org/articles/15650