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Digital Object Identifier (DOI) Under the Context of Research Data Librarianship

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Author : Jia Liu

A digital object identifier (DOI) is an increasingly prominent persistent identifier in finding and accessing scholarly information. This paper intends to present an overview of global development and approaches in the field of DOI and DOI services with a slight geographical focus on Germany.

At first, the initiation and components of the DOI system and the structure of a DOI name are explored. Next, the fundamental and specific characteristics of DOIs are described and DOIs for three (3) kinds of typical intellectual entities in the scholar communication are dealt with; then, a general DOI service pyramid is sketched with brief descriptions of functions of institutions at different levels.

After that, approaches of the research data librarianship community in the field of RDM, especially DOI services, are elaborated. As examples, the DOI services provided in German research libraries as well as best practices of DOI services in a German library are introduced; and finally, the current practices and some issues dealing with DOIs are summarized. It is foreseeable that DOI, which is crucial to FAIR research data, will gain extensive recognition in the scientific world.

URL : Digital Object Identifier (DOI) Under the Context of Research Data Librarianship

DOI : https://doi.org/10.7191/jeslib.2021.1180

Open access book usage data – how close is COUNTER to the other kind?

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Author : Ronald Snijder

In April 2020, the OAPEN Library moved to a new platform, based on DSpace 6. During the same period, IRUS-UK started working on the deployment of Release 5 of the COUNTER Code of Practice (R5). This is, therefore, a good moment to compare two widely used usage metrics – R5 and Google Analytics (GA).

This article discusses the download data of close to 11,000 books and chapters from the OAPEN Library, from the period 15 April 2020 to 31 July 2020. When a book or chapter is downloaded, it is logged by GA and at the same time a signal is sent to IRUS-UK.

This results in two datasets: the monthly downloads measured in GA and the usage reported by R5, also clustered by month. The number of downloads reported by GA is considerably larger than R5. The total number of downloads in GA for the period is over 3.6 million.

In contrast, the amount reported by R5 is 1.5 million, around 400,000 downloads per month. Contrasting R5 and GA data on a country-by-country basis shows significant differences. GA lists more than five times the number of downloads for several countries, although the totals for other countries are about the same.

When looking at individual tiles, of the 500 highest ranked titles in GA that are also part of the 1,000 highest ranked titles in R5, only 6% of the titles are relatively close together. The choice of metric service has considerable consequences on what is reported.

Thus, drawing conclusions about the results should be done with care. One metric is not better than the other, but we should be open about the choices made. After all, open access book metrics are complicated, and we can only benefit from clarity.

URL : Open access book usage data – how close is COUNTER to the other kind?

DOI : http://doi.org/10.1629/uksg.539

Affiliation Information in DataCite Dataset Metadata: a Flemish Case Study

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Author/Auteur : Niek Van Wettere

This article aims to evaluate how and to what extent metadata of datasets indexed in DataCite offer clear human- or machine-readable information that enables the research data to be linked to a particular research institution.

Two main pathways are explored. First, researchers can encode their affiliation information at the moment of data submission. This can be done by means of free-text metadata fields or via the inclusion of identifiers such as GRID/ROR and ORCID. Second, affiliation information can be traced indirectly through linking between a dataset and associated publications, given that the metadata of publications is often more explicit about affiliation information than the metadata of datasets.

Both pathways of affiliation information encoding are evaluated on the basis of metadata pertaining to datasets created at the five Flemish universities. It is shown that good practices such as encoding of affiliation information in a dedicated metadata field or inclusion of ORCID in the metadata are on the rise, but could be expanded further.

Finally, the establishment of links between datasets and related publications is often lacking in dataset metadata, although there are important differences between data repositories, as is also demonstrated in a more data-intensive follow-up analysis based on random samples of metadata records.

It is important that data repositories address this issue by providing a metadata field clearly dedicated to associated publications, prominently displayed on the landing page of the dataset.

URL : Affiliation Information in DataCite Dataset Metadata: a Flemish Case Study

DOI : http://doi.org/10.5334/dsj-2021-013

Day-to-day discovery of preprint–publication links

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Authors : Guillaume Cabanac, Theodora Oikonomidi, Isabelle Boutron

Preprints promote the open and fast communication of non-peer reviewed work. Once a preprint is published in a peer-reviewed venue, the preprint server updates its web page: a prominent hyperlink leading to the newly published work is added.

Linking preprints to publications is of utmost importance as it provides readers with the latest version of a now certified work. Yet leading preprint servers fail to identify all existing preprint–publication links.

This limitation calls for a more thorough approach to this critical information retrieval task: overlooking published evidence translates into partial and even inaccurate systematic reviews on health-related issues, for instance.

We designed an algorithm leveraging the Crossref public and free source of bibliographic metadata to comb the literature for preprint–publication links. We tested it on a reference preprint set identified and curated for a living systematic review on interventions for preventing and treating COVID-19 performed by international collaboration: the COVID-NMA initiative (covid-nma.com).

The reference set comprised 343 preprints, 121 of which appeared as a publication in a peer-reviewed journal. While the preprint servers identified 39.7% of the preprint–publication links, our linker identified 90.9% of the expected links with no clues taken from the preprint servers.

The accuracy of the proposed linker is 91.5% on this reference set, with 90.9% sensitivity and 91.9% specificity. This is a 16.26% increase in accuracy compared to that of preprint servers. We release this software as supplementary material to foster its integration into preprint servers’ workflows and enhance a daily preprint–publication chase that is useful to all readers, including systematic reviewers.

This preprint–publication linker currently provides day-to-day updates to the biomedical experts of the COVID-NMA initiative.

URL : Day-to-day discovery of preprint–publication links

DOI : https://doi.org/10.1007/s11192-021-03900-7

Publication by association: how the COVID-19 pandemic has shown relationships between authors and editorial board members in the field of infectious diseases

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Authors : Clara Locher, David Moher, Ioana Alina Cristea, Florian Naudet

During the COVID-19 pandemic, the rush to scientific and political judgements on the merits of hydroxychloroquine was fuelled by dubious papers which may have been published because the authors were not independent from the practices of the journals in which they appeared.

This example leads us to consider a new type of illegitimate publishing entity, ‘self-promotion journals’ which could be deployed to serve the instrumentalisation of productivity-based metrics, with a ripple effect on decisions about promotion, tenure and grant funding, but also on the quality of manuscripts that are disseminated to the medical community and form the foundation of evidence-based medicine.

DOI : http://dx.doi.org/10.1136/bmjebm-2021-111670

Semantic micro-contributions with decentralized nanopublication services

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Authors : Tobias Kuhn, Ruben Taelman, Vincent Emonet, Haris Antonatos, Stian Soiland-Reyes, Michel Dumontier

While the publication of Linked Data has become increasingly common, the process tends to be a relatively complicated and heavy-weight one. Linked Data is typically published by centralized entities in the form of larger dataset releases, which has the downside that there is a central bottleneck in the form of the organization or individual responsible for the releases.

Moreover, certain kinds of data entries, in particular those with subjective or original content, currently do not fit into any existing dataset and are therefore more difficult to publish.

To address these problems, we present here an approach to use nanopublications and a decentralized network of services to allow users to directly publish small Linked Data statements through a simple and user-friendly interface, called Nanobench, powered by semantic templates that are themselves published as nanopublications.

The published nanopublications are cryptographically verifiable and can be queried through a redundant and decentralized network of services, based on the grlc API generator and a new quad extension of Triple Pattern Fragments.

We show here that these two kinds of services are complementary and together allow us to query nanopublications in a reliable and efficient manner. We also show that Nanobench makes it indeed very easy for users to publish Linked Data statements, even for those who have no prior experience in Linked Data publishing.

URL : Semantic micro-contributions with decentralized nanopublication services

DOI : https://doi.org/10.7717/peerj-cs.387

Open access journal publishing in the business disciplines: A closer look at the low uptake and discipline-specific considerations

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Authors : Mikael Laakso, Bo-Christer Björk

The Internet has enabled efficient electronic publishing of scholarly journals and Open Access business models. Recent studies have shown that adoption of Open Access journals has been uneven across scholarly disciplines, where the business and economics disciplines in particular seem to lag behind all other fields of research.

Through bibliometric analysis of journals indexed in Scopus, we find the share of articles in Open Access journals in business, management, and accounting to be only 6%. We further studied the Open Access availability of articles published during 2014–2019 in journals included in the Financial Times 50 journal list (19,969 articles in total).

None of the journals are full Open Access, but 8% of the articles are individually open and for a further 35% earlier manuscript versions are available openly on the web. The results suggest that the low adoption rate of Open Access journals in the business fields is a side-effect of evaluation practices emphasizing publishing in journals included, in particular, ranking lists, creating disincentives for business model innovation, and barriers for new entrants among journals.

Currently, most business school research has to be made Open Access through other ways than through full Open Access journals, and libraries play an important role in facilitating this in a sustainable way.

URL : Open access journal publishing in the business disciplines: A closer look at the low uptake and discipline-specific considerations

DOI : https://doi.org/10.1177/09610006211006769